Stem-loop cin-mir-5596b

Accession

MI0019166

Description

Ciona intestinalis cin-mir-5596b precursor miRNA

Sequence

66 reads, 24 reads per million, 2 experiments

AUUCUAUCUUAUUCCACAGUACuauaaguauugaaauauaauauaguAUGGUGGGGGAAGAUGGGACAC
.(((((((((.((((((.((((((((.((((....))))..)))))))).)))))).)))))))))...

Structure

--A         A      A        -a    u 
   UUCUAUCUU UUCCAC GUACuaua  guau g
   ||||||||| |||||| ||||||||  ||||  
   AGGGUAGAA GGGGUG UAugauau  uaua a
CAC         G      G        aa    a 

Annotation confidence Not enough data

Genome context

14q: 1660166-1660234 [-]

Mature cin-miR-5596b-5p

• Accession: MIMAT0022327
• Description: Ciona intestinalis cin-miR-5596b-5p mature miRNA
• Sequence: 1 - AUUCUAUCUUAUUCCACAGUAC - 22
• Evidence: not_experimental

Mature cin-miR-5596b-3p

• Accession: MIMAT0022328
• Description: Ciona intestinalis cin-miR-5596b-3p mature miRNA
• Sequence: 48 - AUGGUGGGGGAAGAUGGGACAC - 69
• Evidence: not_experimental

References

1. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52