miRBase entry: mmu-mir-5615-1

Stem-loop mmu-mir-5615-1

Accession

MI0019181

Symbol

MGI: Mir5615-1

Description

Mus musculus mmu-mir-5615-1 precursor miRNA mir-5615

Gene
family?

RF03973; mir-5615

Sequence

256 reads, 1 reads per million, 49 experiments

CUUGGUUGUUUUCUGAGACAGAaaagagucucauuuucUGUCUCAGAAAACAACCAAGGA
(((((((((((((((((((((((((........)))))))))))))))))))))))))..

Structure

--                         gag 
  CUUGGUUGUUUUCUGAGACAGAaaa   u
  |||||||||||||||||||||||||    
  GAACCAACAAAAGACUCUGUcuuuu   c
AG                         acu

Annotation confidence High

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Genome context

chr10: 81104614-81104673 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-5615-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-5615-5p

Accession	MIMAT0022355
Description	Mus musculus mmu-miR-5615-5p mature miRNA
Sequence	1 - CUUGGUUGUUUUCUGAGACAGA - 22
Evidence	not_experimental
Database links
Predicted targets

Mature mmu-miR-5615-3p

Accession	MIMAT0022356
Description	Mus musculus mmu-miR-5615-3p mature miRNA
Sequence	39 - UGUCUCAGAAAACAACCAAGGA - 60
Evidence	not_experimental
Database links
Predicted targets

References

PubMed ID: 21911355
miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
"Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
"Nucleic Acids Res (2012) 40:37-52