Stem-loop mmu-mir-5625

Accession

MI0019194

Symbol

MGI: Mir5625

Description

Mus musculus mmu-mir-5625 precursor miRNA

Sequence

90 reads, 4.0 reads per million, 46 experiments

CCCGGAAGUUCUUGAGUAGGAgacuccacaucccgggugacccggguuggagcugCUGAUUCAAGUGGUCUCUCGUGUCC
..(((.((..(((((((((.((.(((((...((((((...)))))).))))))).)).)))))))....)).))).....

Structure

---CC   A  --UU       -  G  a     cau      u 
     CGG AG    CUUGAGU AG Ag cucca   cccggg  
     ||| ||    ||||||| || || |||||   |||||| g
     GCU UC    GAACUUA UC uc gaggu   gggccc  
CCUGU   C  UGGU       G  g  -     --u      a 

Annotation confidence Not enough data

Genome context

5: 30805280-30805359 [+]

Mature mmu-miR-5625-5p

• Accession: MIMAT0022379
• Description: Mus musculus mmu-miR-5625-5p mature miRNA
• Sequence: 1 - CCCGGAAGUUCUUGAGUAGGA - 21
• Evidence: not_experimental

Mature mmu-miR-5625-3p

• Accession: MIMAT0022380
• Description: Mus musculus mmu-miR-5625-3p mature miRNA
• Sequence: 56 - CUGAUUCAAGUGGUCUCUCGUGUCC - 80
• Evidence: not_experimental

References

1. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52