Stem-loop mmu-mir-5627

Accession

MI0019198

Symbol

MGI: Mir5627

Description

Mus musculus mmu-mir-5627 precursor miRNA

Literature search

1 open access papers mention mmu-mir-5627
(2 sentences)

Sequence

62 reads, 1 reads per million, 37 experiments

AGAGGGUGCGCCGGGCCCUGCGuccccgcccuagaggACAGGGCUCUCCGGCGCCCCUCGU
.(((((.((((((((((((..((((.(......).)))))))))...))))))))))))..

Structure

-A     U       ---     GC    c gc 
  GAGGG GCGCCGG   GCCCU  Gucc c  c
  ||||| |||||||   |||||  |||| |   
  CUCCC CGCGGCC   CGGGA  CAgg g  c
UG     -       UCU     --    a au 

Annotation confidence Not enough data

Genome context

chr12: 44210313-44210373 [+]

Mature mmu-miR-5627-5p

• Accession: MIMAT0022385
• Description: Mus musculus mmu-miR-5627-5p mature miRNA
• Sequence: 1 - AGAGGGUGCGCCGGGCCCUGCG - 22
• Evidence: not_experimental

Mature mmu-miR-5627-3p

• Accession: MIMAT0022386
• Description: Mus musculus mmu-miR-5627-3p mature miRNA
• Sequence: 38 - ACAGGGCUCUCCGGCGCCCCUCGU - 61
• Evidence: not_experimental

References

1. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52