Accession
MI0019417
Description
Oryzias latipes
ola-mir-18-1 precursor miRNA
Sequence
33313
reads,
327.0
reads per million, 45 experiments
cauacgauguacugucuuugugcUAAGGUGCAUCUAGUGCAGAUAGugaaauagacuagcaccuACUGCCCUAAGUGCUCCUUCUGGcauaaggggcuguaauaug
......((((((.(((((((((((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..)))))))).)))).)).)))).
......((((((.(((((((((((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..)))))))).)))).)).)))).
Structure
cauacg - u - -- U C U A - aaau
augu ac gucu uugugcUA AGG GCAU UAG GCAG UAG ug a
|||| || |||| |||||||| ||| |||| ||| |||| ||| || g
uaua ug cggg aauacGGU UCC CGUG AUC CGUC Auc ac a
-----g a u g CU U A C - c gauc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
3: 15107452-15107557 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ola-mir-18-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ola-miR-18-5p
| Accession | MIMAT0022532 |
| Description | Oryzias latipes ola-miR-18-5p mature miRNA |
| Sequence | 24 - UAAGGUGCAUCUAGUGCAGAUAG - 46 |
| Evidence |
experimental
SOLiD [1] |
Mature ola-miR-18-3p
| Accession | MIMAT0057070 |
| Description | Oryzias latipes ola-miR-18-3p mature miRNA |
| Sequence | 65 - ACUGCCCUAAGUGCUCCUUCUGG - 87 |
| Evidence |
experimental
SOLiD [1] |
References
|
