miRBase entry: 21143817

Discovery and characterization of medaka miRNA genes by next generation sequencing platform

PubMed ID 21143817
Authors Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
Journal BMC Genomics
Volume 11
Pages S8

There are 152 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
ola-mir-193a MI0019413 None 1 11805716 11805813 + -
ola-mir-218a-1 MI0019414 None 1 17054065 17054169 - -
ola-mir-221 MI0019415 None 2 28254368 28254470 - -
ola-mir-222 MI0019416 None 2 28254507 28254612 - -
ola-mir-18-1 MI0019417 None 3 15107452 15107557 + -
ola-mir-20a-1 MI0019418 None 3 15107783 15107891 + -
ola-mir-92a-2 MI0019419 None 3 15108084 15108186 + -
ola-mir-184-1 MI0019420 None 3 25857484 25857579 + -
ola-mir-9a-2 MI0019421 None 3 20705983 20706084 - -
ola-mir-199a-1 MI0019422 None 4 4302500 4302597 + -
ola-mir-181b-1 MI0019423 None 4 12358479 12358573 + -
ola-mir-101a MI0019424 None 4 16768335 16768442 + -
ola-mir-27b MI0019425 None 4 34610548 34610648 + -
ola-mir-24a-1 MI0019426 None 4 34612920 34613020 + -
ola-mir-9b-1 MI0019427 None 4 2428407 2428513 - -
ola-mir-135a-1 MI0019428 None 5 24516531 24516635 - -
ola-mir-499 MI0019429 None 5 26842783 26842879 - -
ola-let-7a-1 MI0019430 None 6 6146863 6146961 + -
ola-let-7b-1 MI0019431 None 6 6147325 6147415 + -
ola-mir-184-2 MI0019432 None 6 12810246 12810343 + -
ola-mir-9a-3 MI0019433 None 6 17135424 17135527 + -
ola-mir-140 MI0019434 None 6 22770458 22770552 + -
ola-mir-138 MI0019435 None 6 23333297 23333392 + -
ola-mir-183-1 MI0019436 None 6 16407646 16407754 - -
ola-mir-1-1 MI0019437 None 7 5261661 5261761 + -
ola-mir-133-2 MI0019438 None 7 5284126 5284231 + -
ola-mir-462 MI0019439 None 7 6519353 6519420 + -
ola-mir-731 MI0019440 None 7 6519816 6519913 + -
ola-let-7g MI0019441 None 7 11992087 11992180 + -
ola-mir-196a MI0019442 None 7 12869858 12869962 + -
ola-let-7e MI0019443 None 7 13613915 13613999 + -
ola-let-7a-2 MI0019444 None 7 13614181 13614265 + -
ola-mir-1388 MI0019445 None 7 15988885 15988992 + -
ola-mir-29b-1 MI0019446 None 7 23588373 23588474 + -
ola-mir-29a MI0019447 None 7 23588631 23588722 + -
ola-mir-200a MI0019448 None 7 217696 217792 - -
ola-mir-200b MI0019449 None 7 217985 218082 - -
ola-mir-124-1 MI0019450 None 7 16234646 16234749 - -
ola-mir-135a-2 MI0019451 None 7 20955695 20955792 - -
ola-mir-124-2 MI0019452 None 7 22012171 22012274 - -
ola-mir-205 MI0019453 None 7 22980091 22980169 - -
ola-mir-26-1 MI0019454 None 7 26163773 26163870 - -
ola-mir-199a-2 MI0019455 None 8 9465167 9465270 + -
ola-mir-33 MI0019456 None 8 12694467 12694560 + -
ola-mir-137 MI0019457 None 8 22468612 22468707 + -
ola-mir-152 MI0019458 None 8 24625017 24625117 + -
ola-mir-338-1 MI0019459 None 8 10136028 10136119 - -
ola-mir-24a-2 MI0019460 None 8 13687323 13687411 - -
ola-mir-27c MI0019461 None 8 13688175 13688281 - -
ola-mir-23a-1 MI0019462 None 8 13688406 13688502 - -
ola-mir-150 MI0019463 None 8 25382196 25382304 - -
ola-mir-24c MI0019464 None 9 7539271 7539366 + -
ola-mir-181a-1 MI0019465 None 9 27956541 27956646 + -
ola-mir-181b-2 MI0019466 None 9 27956674 27956783 + -
ola-mir-24a-3 MI0019467 None 9 8309654 8309755 - -
ola-mir-23b MI0019468 None 9 8313668 8313776 - -
ola-mir-9a-4 MI0019469 None 9 14619699 14619802 - -
ola-mir-204 MI0019470 None 9 16361098 16361193 - -
ola-mir-1306 MI0019471 None 9 23130448 23130557 - -
ola-mir-218a-2 MI0019472 None 10 1526115 1526205 + -
ola-mir-106a MI0019473 None 10 2001187 2001293 + -
ola-mir-19d MI0019474 None 10 2001485 2001577 + -
ola-mir-103-1 MI0019475 None 10 2552790 2552891 + -
ola-mir-19b-2 MI0019476 None 10 23325051 23325153 - -
ola-mir-458 MI0019477 None 10 25327849 25327943 - -
ola-mir-187 MI0019478 None 11 7840464 7840550 + -
ola-mir-30e MI0019479 None 11 21880298 21880403 + -
ola-mir-30c MI0019480 None 11 21880471 21880580 + -
ola-mir-30d MI0019481 None 11 24547813 24547917 + -
ola-mir-128 MI0019482 None 11 21614207 21614306 - -
ola-mir-126 MI0019483 None 12 5052105 5052208 + -
ola-mir-122 MI0019484 None 12 9243561 9243670 + -
ola-mir-199a-3 MI0019485 None 12 11677445 11677547 + -
ola-mir-101b MI0019486 None 12 15502016 15502123 + -
ola-mir-455 MI0019487 None 12 7386668 7386750 - -
ola-mir-218b MI0019488 None 12 14121562 14121651 - -
ola-mir-301b MI0019489 None 12 14199739 14199843 - -
ola-mir-130c MI0019490 None 12 14200032 14200135 - -
ola-mir-16 MI0019491 None 13 12901172 12901274 + -
ola-mir-100-1 MI0019492 None 13 19564760 19564859 + -
ola-mir-125c MI0019493 None 13 19575653 19575759 + -
ola-mir-139 MI0019494 None 13 21690229 21690327 + -
ola-mir-132 MI0019495 None 13 10157836 10157934 - -
ola-mir-22-1 MI0019496 None 13 16589470 16589563 - -
ola-mir-21-1 MI0019497 None 13 24451854 24451948 - -
ola-mir-301a MI0019498 None 14 13145539 13145637 + -
ola-mir-194 MI0019499 None 14 20215672 20215781 + -
ola-mir-192 MI0019500 None 14 20215822 20215919 + -
ola-mir-144 MI0019501 None 14 21443523 21443630 + -
ola-mir-21-2 MI0019502 None 14 22568052 22568138 + -
ola-mir-125b-2 MI0019503 None 14 1144184 1144291 - -
ola-let-7c MI0019504 None 14 1150882 1150977 - -
ola-mir-99 MI0019505 None 14 1151199 1151302 - -
ola-mir-22-2 MI0019506 None 14 8560446 8560539 - -
ola-mir-125b-1 MI0019507 None 14 15646480 15646580 - -
ola-let-7a-4 MI0019508 None 14 15650352 15650450 - -
ola-mir-100-2 MI0019509 None 14 15650826 15650927 - -
ola-mir-223 MI0019510 None 14 17328705 17328803 - -
ola-mir-142 MI0019511 None 14 21087850 21087953 - -
ola-mir-107 MI0019512 None 15 14626163 14626269 + -
ola-mir-10d MI0019513 None 15 4353705 4353809 - -
ola-mir-146a MI0019514 None 15 22802269 22802374 - -
ola-mir-9a-1 MI0019515 None 16 23834590 23834697 + -
ola-mir-92b MI0019516 None 16 29384732 29384833 + -
ola-mir-125a MI0019517 None 16 11685123 11685209 - -
ola-mir-199a-4 MI0019518 None 17 16117948 16118038 + -
ola-mir-214 MI0019519 None 17 16119235 16119335 + -
ola-mir-7 MI0019520 None 17 23201267 23201373 + -
ola-mir-26-2 MI0019521 None 17 17792213 17792312 - -
ola-mir-9b-2 MI0019522 None 17 23411155 23411254 - -
ola-mir-460 MI0019523 None 17 29024041 29024125 - -
ola-mir-133-1 MI0019524 None 17 29407313 29407419 - -
ola-mir-1-2 MI0019525 None 17 29410125 29410225 - -
ola-mir-24b MI0019526 None 17 29776748 29776854 - -
ola-mir-27a MI0019527 None 17 29779201 29779293 - -
ola-mir-23a-2 MI0019528 None 17 29781101 29781198 - -
ola-mir-27d MI0019529 None 17 31554033 31554120 - -
ola-mir-31 MI0019530 None 18 10684065 10684172 - -
ola-mir-338-2 MI0019531 None 19 2103870 2103971 - -
ola-mir-26-3 MI0019532 None 20 16297176 16297277 + -
ola-mir-124-3 MI0019533 None 20 15452264 15452354 - -
ola-mir-15a MI0019534 None 21 11191711 11191814 + -
ola-mir-10b MI0019535 None 21 24625727 24625834 + -
ola-mir-148 MI0019536 None 21 24768738 24768838 + -
ola-mir-92a-1 MI0019537 None 21 25693131 25693234 - -
ola-mir-19b-1 MI0019538 None 21 25693239 25693340 - -
ola-mir-20a-2 MI0019539 None 21 25693363 25693464 - -
ola-mir-19a MI0019540 None 21 25693520 25693627 - -
ola-mir-18-2 MI0019541 None 21 25693655 25693746 - -
ola-mir-17 MI0019542 None 21 25694055 25694151 - -
ola-mir-203 MI0019543 None 22 12363247 12363355 - -
ola-mir-103-2 MI0019544 None 22 25839317 25839417 - -
ola-mir-29b-2 MI0019545 None 23 8740355 8740453 + -
ola-mir-29c MI0019546 None 23 8740492 8740593 + -
ola-mir-135b MI0019547 None 23 13494412 13494501 + -
ola-mir-183-2 MI0019548 None 23 14604483 14604573 + -
ola-mir-182 MI0019549 None 23 14604891 14604991 + -
ola-let-7b-2 MI0019550 None 23 6185677 6185764 - -
ola-let-7a-3 MI0019551 None 23 6186600 6186694 - -
ola-mir-206 MI0019552 None 24 13641157 13641256 + -
ola-mir-133-3 MI0019553 None 24 13641851 13641950 + -
ola-mir-210 MI0019554 None scaffold676 57142 57246 + -
ola-mir-729 MI0019555 None scaffold1021 47304 47403 + -
ola-mir-190b MI0019556 None scaffold3772 6997 7097 + -
ola-mir-9a-5 MI0019557 None scaffold7831 774 875 + -
ola-mir-459 MI0019558 None ultracontig26 364478 364582 + -
ola-mir-30a MI0019559 None ultracontig66 99987 100090 + -
ola-mir-181a-2 MI0019560 None ultracontig105 3834 3903 + -
ola-mir-143 MI0019561 None ultracontig115 5319909 5320017 + -
ola-mir-145 MI0019562 None ultracontig115 5320131 5320190 + -
ola-mir-338-3 MI0019563 None ultracontig221 99754 99854 - -
ola-mir-1788 MI0019564 None ultracontig257 1240225 1240320 - -



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