Stem-loop ola-mir-190b

Accession

MI0019556

Description

Oryzias latipes ola-mir-190b precursor miRNA

Sequence

ugaccugcuagaggcugugUGAUAUGUUUGAUAUUCGGUUGuucuugugcuucaucaugucaacuaaauaucagacauauuccaacagacucuggcccuca
......(((((((.(((((.(((((((((((((((.(((((....((........))...))))).))))))))))))))).).)))).))))))).....

Structure

ugaccu       g    - U               C     uucu  ugc 
      gcuagag cugu g GAUAUGUUUGAUAUU GGUUG    ug   u
      ||||||| |||| | ||||||||||||||| |||||    ||    
      cggucuc gaca c uuauacagacuauaa ucaac    ac   u
-acucc       a    a c               a     -ugu  uac 

Annotation confidence Not enough data

Genome context

scaffold3772: 6997-7097 [+]

Mature ola-miR-190b

• Accession: MIMAT0022663
• Description: Oryzias latipes ola-miR-190b mature miRNA
• Sequence: 20 - UGAUAUGUUUGAUAUUCGGUUG - 41
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8