Stem-loop ola-mir-103-2

Accession

MI0019544

Description

Oryzias latipes ola-mir-103-2 precursor miRNA

Sequence

74512 reads, 775.0 reads per million, 49 experiments

gccguguucccucucugccuucAGCCUCUUUAUGAUGCUGCCUUGUggcgucuugaucaAGCAGCAUUGUACAGGGCUAUGAaggcguggaggagcuucuc
.....(((((.(((.(((((((((((.((.(((((((((((.(((............)))))))))))))).)))))..)))))))).)))))))).....

Structure

gccgu     c   c        --   U  U           C   Uggcg 
     guucc ucu ugccuucA  GCC CU UAUGAUGCUGC UUG     u
     ||||| ||| ||||||||  ||| || ||||||||||| |||      
     cgagg agg gcggaAGU  CGG GA AUGUUACGACG Aac     c
cucuu     -   u        AU   -  C           -   uaguu 

Annotation confidence Medium

Genome context

22: 25839317-25839417 [-]

Mature ola-miR-103-2-5p

• Accession: MIMAT0057115
• Description: Oryzias latipes ola-miR-103-2-5p mature miRNA
• Sequence: 23 - AGCCUCUUUAUGAUGCUGCCUUGU - 46
• Evidence: experimental ; SOLiD [1]

Mature ola-miR-103-3p

• Accession: MIMAT0022593
• Description: Oryzias latipes ola-miR-103-3p mature miRNA
• Sequence: 60 - AGCAGCAUUGUACAGGGCUAUGA - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8