Stem-loop ola-mir-181b-2

Accession

MI0019466

Description

Oryzias latipes ola-mir-181b-2 precursor miRNA

Literature search

1 open access papers mention ola-mir-181b-2
(18 sentences)

Sequence

uccaggagucaaccuuaaggcugcaauaAACAUUCAUUGCUGUCGGUGGGUUuaugcaggaacaacucacugaucaaugaaugcaaacugcgguucgcacauccugcuga
..((((((((((((...((..((((.......(((((((..(((((((((((...........))))))))))))))))))))))..))..)))).).)).)))))....

Structure

--uc     -  - -    uua  gc    auaAACA       CU           uaug 
    cagga gu c aacc   ag  ugca       UUCAUUG  GUCGGUGGGUU    c
    ||||| || | ||||   ||  ||||       |||||||  |||||||||||    a
    guccu ca g uugg   uc  acgu       aaguaac  uagucacucaa    g
aguc     a  c c    -cg  aa    -------       --           caag 

Annotation confidence Not enough data

Genome context

9: 27956674-27956783 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ola-mir-181b-2

Mature ola-miR-181b-5p

• Accession: MIMAT0022540
• Description: Oryzias latipes ola-miR-181b-5p mature miRNA
• Sequence: 29 - AACAUUCAUUGCUGUCGGUGGGUU - 52
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8