Stem-loop ola-mir-132

Accession

MI0019495

Description

Oryzias latipes ola-mir-132 precursor miRNA

Literature search

1 open access papers mention ola-mir-132
(1 sentences)

Sequence

11597 reads, 116.0 reads per million, 36 experiments

uuccacugucuccaugguaACCGUGGCAUUAGAUUGUUACUguagcaacagcaccacuggUAACAGUCUACAGCCAUGGUCGcuagggggcaaaagaca
......(((((((.((((.((((((((..((((((((((((((.((....))...)).))))))))))))..)))))))).))))))))))).......

Structure

-uuccac       a    a        AU            -  --a  a 
       ugucucc uggu ACCGUGGC  UAGAUUGUUACU gu   gc a
       ||||||| |||| ||||||||  |||||||||||| ||   ||  
       acggggg aucG UGGUACCG  AUCUGACAAUgg ca   cg c
acagaaa       -    C        AC            u  cca  a 

Annotation confidence High

Genome context

13: 10157836-10157934 [-]

Mature ola-miR-132-5p

• Accession: MIMAT0057130
• Description: Oryzias latipes ola-miR-132-5p mature miRNA
• Sequence: 20 - ACCGUGGCAUUAGAUUGUUACU - 41
• Evidence: experimental ; SOLiD [1]

Mature ola-miR-132-3p

• Accession: MIMAT0022617
• Description: Oryzias latipes ola-miR-132-3p mature miRNA
• Sequence: 61 - UAACAGUCUACAGCCAUGGUCG - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8