Stem-loop ola-mir-1306

Accession

MI0019471

Description

Oryzias latipes ola-mir-1306 precursor miRNA

Sequence

cucccauuggagccuccugaugauuucggccuggaacagggcagggcaccuccaCCACCUCCCCUGCAAACGUCCagugacgcagagguaauggacguuagcucuggugg
.......(((((..(((((.....(((......))).....)))))...)))))(((((......((.((((((((...((......))..)))))))).))...)))))

Structure

cucccauuggagccuccugaugauuucggccuggaacagggcagggcaccucca     UCCCCU  A        gug  gc 
                                                      CCACC      GC AACGUCCa   ac  a
                                                      |||||      || ||||||||   ||   
                                                      ggugg      cg uugcaggu   ug  g
------------------------------------------------------     ---ucu  a        -aa  ga 

Annotation confidence Not enough data

Genome context

9: 23130448-23130557 [-]

Mature ola-miR-1306

• Accession: MIMAT0022590
• Description: Oryzias latipes ola-miR-1306 mature miRNA
• Sequence: 55 - CCACCUCCCCUGCAAACGUCC - 75
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8