Stem-loop ola-mir-26-2

Accession

MI0019521

Description

Oryzias latipes ola-mir-26-2 precursor miRNA

Sequence

5714111 reads, 50690.0 reads per million, 49 experiments

gccugacuggcuguuaucaagUUCAAGUAAUCCAGGAUAGGCUguuuguauccugguuggCCUAUUCAUGAUUACUUGCACUggguggcagcuccuagau
..(((...((((((((((.(((.(((((((((..((((((((((.............))))))))))..))))))))).))).))))))))))..)))..

Structure

gc   acu          a   U         CA          uuugu 
  cug   ggcuguuauc agU CAAGUAAUC  GGAUAGGCUg     a
  |||   |||||||||| ||| |||||||||  ||||||||||     u
  gau   ucgacggugg UCA GUUCAUUAG  CUUAUCCggu     c
ua   -cc          g   C         UA          ugguc 

Annotation confidence High

Genome context

17: 17792213-17792312 [-]

Mature ola-miR-26-5p

• Accession: MIMAT0022575
• Description: Oryzias latipes ola-miR-26-5p mature miRNA
• Sequence: 22 - UUCAAGUAAUCCAGGAUAGGCU - 43
• Evidence: experimental ; SOLiD [1]

Mature ola-miR-26-2-3p

• Accession: MIMAT0057102
• Description: Oryzias latipes ola-miR-26-2-3p mature miRNA
• Sequence: 61 - CCUAUUCAUGAUUACUUGCACU - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8