miRBase entry: ola-mir-203

Stem-loop ola-mir-203


Accession
MI0019543
Description
Oryzias latipes ola-mir-203 precursor miRNA


Sequence

4164769 reads, 17834.0 reads per million, 48 experiments
aaauguguugucauucugauuaAGUGGUUCUCAACAGUUCAACAguucuuugagaaaauuGUGAAAUGUUUAGGACCACUUGaccagucagacaaaugcuaccgucuuu
....((((((((...(((.((((((((((((.((((.((((.(((((((...)))..)))))))).)))).)))))))))))).)))...))).)))))..........

Structure
------aaau     -   auu   a            C    G    A    --   u 
          guguu guc   cug uuaAGUGGUUCU AACA UUCA CAgu  ucu  
          ||||| |||   ||| |||||||||||| |||| |||| ||||  ||| u
          cguaa cag   gac aGUUCACCAGGA UUGU AAGU Guua  aga  
uuucugccau     a   acu   c            U    A    -    aa   g 


Annotation confidence High
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Genome context
22: 12363247-12363355 [-]

Database links

Mature ola-miR-203-5p

Accession MIMAT0057159
Description Oryzias latipes ola-miR-203-5p mature miRNA
Sequence 23 - AGUGGUUCUCAACAGUUCAACA - 44
Evidence experimental
SOLiD [1]

Mature ola-miR-203-3p

Accession MIMAT0022655
Description Oryzias latipes ola-miR-203-3p mature miRNA
Sequence 61 - GUGAAAUGUUUAGGACCACUUG - 82
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8