Stem-loop ola-mir-26-3

Accession

MI0019532

Description

Oryzias latipes ola-mir-26-3 precursor miRNA

Sequence

5828087 reads, 51290.0 reads per million, 49 experiments

ugcguuguugcuggaaccaggUUCAAGUAAUCCAGGAUAGGCUuucugcaucugauuuggCCUAUACUUGAUUACUUGCACUuggaaccaguuccugaccca
...(((...(((((..((((((.(((((((((.((..((((((.((.......))...))))))..)).))))))))).))))))..)))))....)))...

Structure

ugc   -guu     aa      U         C  GA      --u  ug 
   guu    gcugg  ccaggU CAAGUAAUC AG  UAGGCU   uc  c
   |||    |||||  |||||| ||||||||| ||  ||||||   ||  a
   cag    ugacc  gguUCA GUUCAUUAG UC  AUCCgg   ag  u
acc   uccu     aa      C         U  AU      uuu  uc 

Annotation confidence High

Genome context

20: 16297176-16297277 [+]

Mature ola-miR-26-5p

• Accession: MIMAT0022575
• Description: Oryzias latipes ola-miR-26-5p mature miRNA
• Sequence: 22 - UUCAAGUAAUCCAGGAUAGGCU - 43
• Evidence: experimental ; SOLiD [1]

Mature ola-miR-26-3-3p

• Accession: MIMAT0057103
• Description: Oryzias latipes ola-miR-26-3-3p mature miRNA
• Sequence: 61 - CCUAUACUUGAUUACUUGCACU - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8