Stem-loop ola-mir-184-1

Accession

MI0019420

Description

Oryzias latipes ola-mir-184-1 precursor miRNA

Literature search

1 open access papers mention ola-mir-184-1
(1 sentences)

Sequence

uuauagucacucacaucUCCUUAUCACUUUUCCAGCCCAgcuauguggucuguauucguUGGACGGAGAACUGAUAAGGGcaugugcaugacauua
.....((((..(((((.(((((((((.((((((.(.(((((...(((.....)))..))))).))))))).))))))))).)))))..))))....

Structure

uuaua    cu     c         C      A C     uau   g 
     guca  cacau UCCUUAUCA UUUUCC G CCAgc   gug u
     ||||  ||||| ||||||||| |||||| | |||||   ||| c
     cagu  gugua GGGAAUAGU AAGAGG C GGUug   uau u
-auua    ac     c         C      - A     -cu   g 

Annotation confidence Not enough data

Genome context

3: 25857484-25857579 [+]

Mature ola-miR-184-5p

• Accession: MIMAT0022535
• Description: Oryzias latipes ola-miR-184-5p mature miRNA
• Sequence: 18 - UCCUUAUCACUUUUCCAGCCCA - 39
• Evidence: experimental ; SOLiD [1]

Mature ola-miR-184-3p

• Accession: MIMAT0022536
• Description: Oryzias latipes ola-miR-184-3p mature miRNA
• Sequence: 60 - UGGACGGAGAACUGAUAAGGG - 80
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8