miRBase entry: spu-mir-92e

Stem-loop spu-mir-92e

Accession

MI0020184

Description

Strongylocentrotus purpuratus spu-mir-92e precursor miRNA

Sequence

ggucguggugagugcaauguucuguugucucgaaugaaaaUAUUGCACUUACCCCGGCUUA
(((((.(((((((((((((((.((((......))))..))))))))))))))).)))))..

Structure

--     u               -c    gu 
  ggucg ggugagugcaauguu  uguu  c
  ||||| |||||||||||||||  ||||   
  UCGGC CCAUUCACGUUAUaa  guaa  u
AU     C               aa    gc

Annotation confidence Not enough data

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Genome context

AAGJ05134155.1: 22757-22817 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from spu-mir-92e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature spu-miR-92e

Accession	MIMAT0023513
Description	Strongylocentrotus purpuratus spu-miR-92e mature miRNA
Sequence	41 - UAUUGCACUUACCCCGGCUUA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 22216218
RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star
Kadri S, Hinman VF, Benos PV
PLoS One (2011) 6:e29217