miRBase entry: spu-mir-92e

Stem-loop spu-mir-92e


Accession
MI0020184
Description
Strongylocentrotus purpuratus spu-mir-92e precursor miRNA


Sequence


ggucguggugagugcaauguucuguugucucgaaugaaaaUAUUGCACUUACCCCGGCUUA
(((((.(((((((((((((((.((((......))))..))))))))))))))).)))))..

Structure
--     u               -c    gu 
  ggucg ggugagugcaauguu  uguu  c
  ||||| |||||||||||||||  ||||   
  UCGGC CCAUUCACGUUAUaa  guaa  u
AU     C               aa    gc 


Annotation confidence Not enough data
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Genome context
gb|AAGJ06000006.1|: 15043365-15043425 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from spu-mir-92e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spu-miR-92e-3p

Accession MIMAT0023513
Description Strongylocentrotus purpuratus spu-miR-92e-3p mature miRNA
Sequence 41 - UAUUGCACUUACCCCGGCUUA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22216218
    RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star
    Kadri S, Hinman VF, Benos PV
    PLoS One (2011) 6:e29217