Stem-loop cgr-let-7i

Accession

MI0020374

Description

Cricetulus griseus cgr-let-7i precursor miRNA

Literature search

1 open access papers mention cgr-let-7i
(1 sentences)

Sequence

10677518 reads, 30936.0 reads per million, 55 experiments

uggcUGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCUagugcugg
((((.(((((((((((((((((.(((((.(((((.........)))))))........))).))))))))))))))))))))).......

Structure

-------    U                 U   --------  u     ugu 
       uggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
       |||| ||||||||||||||||| |||        || |||||   a
       aUCG UUCCGUCAUCGAACGCG Caa        uc gcccg   c
ggucgug    -                 U   uagaggug  -     uua 

Annotation confidence High

Genome context

Unknown

Mature cgr-let-7i-5p

• Accession: MIMAT0061408
• Description: Cricetulus griseus cgr-let-7i-5p mature miRNA
• Sequence: 5 - UGAGGUAGUAGUUUGUGCUGUU - 26
• Evidence: experimental ; Illumina [1]

Mature cgr-let-7i-3p

• Accession: MIMAT0023724
• Description: Cricetulus griseus cgr-let-7i-3p mature miRNA
• Sequence: 61 - CUGCGCAAGCUACUGCCUUGCU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75