Stem-loop cgr-mir-101b

Accession

MI0020377

Description

Cricetulus griseus cgr-mir-101b precursor miRNA

Sequence

346306 reads, 4822 reads per million, 6 experiments

guccuuuuuCGGUUAUCAUGGUACCGAUGCUGuauaucugaaaggUACAGUACUGUGAUAACUGAAGaaugguggug
..((((((((((((((((((((((.(.((((............))))).)))))))))))))))))))).)).....

Structure

---gu  -                    C A    Guaua 
     cc uuuuuCGGUUAUCAUGGUAC G UGCU     u
     || |||||||||||||||||||| | ||||      
     gg aaGAAGUCAAUAGUGUCAUG C AUgg     c
guggu  u                    A -    aaagu 

Annotation confidence Low

Genome context

JH000649.1: 945587-945663 [+]

Mature cgr-miR-101b-5p

• Accession: MIMAT0023728
• Description: Cricetulus griseus cgr-miR-101b-5p mature miRNA
• Sequence: 10 - CGGUUAUCAUGGUACCGAUGCUG - 32
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-101b-3p

• Accession: MIMAT0023729
• Description: Cricetulus griseus cgr-miR-101b-3p mature miRNA
• Sequence: 46 - UACAGUACUGUGAUAACUGAAG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75