Stem-loop cgr-mir-103

Accession

MI0020378

Description

Cricetulus griseus cgr-mir-103 precursor miRNA

Sequence

620564 reads, 8660 reads per million, 6 experiments

ucgugcuuucAGCUUCUUUACAGUGCUGCCUUGUagcauucaggucaAGCAGCAUUGUACAGGGCUAUGAaagaaccaa
..((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).))...

Structure

-uc  g      --   U  U           C   U g a 
   gu cuuucA  GCU CU UACAGUGCUGC UUG a c u
   || ||||||  ||| || ||||||||||| ||| | | u
   ca gaaAGU  CGG GA AUGUUACGACG Aac u g c
aac  a      AU   -  C           -   - g a 

Annotation confidence Low

Genome context

JH000136.1: 1241800-1241878 [-]

Mature cgr-miR-103-5p

• Accession: MIMAT0023730
• Description: Cricetulus griseus cgr-miR-103-5p mature miRNA
• Sequence: 11 - AGCUUCUUUACAGUGCUGCCUUGU - 34
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-103-3p

• Accession: MIMAT0023731
• Description: Cricetulus griseus cgr-miR-103-3p mature miRNA
• Sequence: 48 - AGCAGCAUUGUACAGGGCUAUGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75