Stem-loop cgr-mir-10a

Accession

MI0020381

Description

Cricetulus griseus cgr-mir-10a precursor miRNA

Literature search

1 open access papers mention cgr-mir-10a
(3 sentences)

Sequence

2789108 reads, 38558 reads per million, 6 experiments

uucuguauaUACCCUGUAGAUCCGAAUUUGUguaaggaauuuuguggucaCAAAUUCGUAUCUAGGGGAAUauguaguuga
..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))....

Structure

--uu        A    G     C          uaaggaa 
    cuguauaU CCCU UAGAU CGAAUUUGUg       u
    |||||||| |||| ||||| ||||||||||        
    gauguaUA GGGG AUCUA GCUUAAACac       u
aguu        A    -     U          ugguguu 

Annotation confidence High

Genome context

JH000166.1: 154110-154190 [+]

Mature cgr-miR-10a-5p

• Accession: MIMAT0023735
• Description: Cricetulus griseus cgr-miR-10a-5p mature miRNA
• Sequence: 10 - UACCCUGUAGAUCCGAAUUUGU - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-10a-3p

• Accession: MIMAT0023736
• Description: Cricetulus griseus cgr-miR-10a-3p mature miRNA
• Sequence: 51 - CAAAUUCGUAUCUAGGGGAAU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75