Stem-loop cgr-mir-122

Accession

MI0020383

Description

Cricetulus griseus cgr-mir-122 precursor miRNA

Literature search

4 open access papers mention cgr-mir-122
(21 sentences)

Sequence

4190 reads, 53.0 reads per million, 17 experiments

agcagagcugUGGAGUGUGACAAUGGUGUUUguguccaaacuaucaaacgccauuaucacacuaaauagcuacugcuagg
(((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))...

Structure

---     -      GG       C           ugucc 
   agcag agcugU  AGUGUGA AAUGGUGUUUg     a
   ||||| ||||||  ||||||| |||||||||||      
   ucguc ucgaua  ucacacu uuaccgcaaac     a
gga     a      aa       a           uauca 

Annotation confidence Not enough data

Genome context

JH000659.1: 638593-638672 [-]

Mature cgr-miR-122-5p

• Accession: MIMAT0023739
• Description: Cricetulus griseus cgr-miR-122-5p mature miRNA
• Sequence: 11 - UGGAGUGUGACAAUGGUGUUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75