Stem-loop cgr-mir-125a

Accession

MI0020385

Description

Cricetulus griseus cgr-mir-125a precursor miRNA

Sequence

42825 reads, 592 reads per million, 6 experiments

gccucugggUCCCUGAGACCCUUUAACCUGUGAggacguccagggucACAGGUGAGGUUCUUGGGAGCcuggcgccug
(((...((.((((.((((.((((..((((((((...(.....)..)))))))))))).)))))))).)).))).....

Structure

-----   ucu  g    U    C    UA        gga g 
     gcc   gg UCCC GAGA CCUU  ACCUGUGA   c u
     |||   || |||| |||| ||||  ||||||||   | c
     cgg   cC AGGG UUCU GGAG  UGGACAcu   g c
guccg   --u  G    -    U    --        -gg a 

Annotation confidence High

Genome context

Unknown

Mature cgr-miR-125a-5p

• Accession: MIMAT0023741
• Description: Cricetulus griseus cgr-miR-125a-5p mature miRNA
• Sequence: 10 - UCCCUGAGACCCUUUAACCUGUGA - 33
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-125a-3p

• Accession: MIMAT0023742
• Description: Cricetulus griseus cgr-miR-125a-3p mature miRNA
• Sequence: 48 - ACAGGUGAGGUUCUUGGGAGC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75