Stem-loop cgr-mir-128

Accession

MI0020391

Description

Cricetulus griseus cgr-mir-128 precursor miRNA

Sequence

6446 reads, 94 reads per million, 6 experiments

uguuggauuCGGGGCCGUAGCACUGUCUGAGAgguguauauuucUCACAGUGAACCGGUCUCUUUuucagcugcu
.((((((...(((((((...((((((..(((((((....)))))))))))))...)))))))...))))))....

Structure

---u      uuC       UAG      CU       g 
    guugga   GGGGCCG   CACUGU  GAGAggu u
    ||||||   |||||||   ||||||  |||||||  
    cgacuu   CUCUGGC   GUGACA  CUcuuua a
ucgu      UUU       CAA      --       u 

Annotation confidence Low

Genome context

JH000082.1: 511517-511591 [+]

Mature cgr-miR-128-5p

• Accession: MIMAT0023749
• Description: Cricetulus griseus cgr-miR-128-5p mature miRNA
• Sequence: 10 - CGGGGCCGUAGCACUGUCUGAGA - 32
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-128-3p

• Accession: MIMAT0023750
• Description: Cricetulus griseus cgr-miR-128-3p mature miRNA
• Sequence: 45 - UCACAGUGAACCGGUCUCUUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75