Stem-loop cgr-mir-147

Accession

MI0020409

Description

Cricetulus griseus cgr-mir-147 precursor miRNA

Literature search

1 open access papers mention cgr-mir-147
(3 sentences)

Sequence

5299 reads, 73 reads per million, 6 experiments

uacucuaugaaucuaguggaaacacuuccgcacaaacuagauuuugauaccaGUGUGCGGAAAUGCUUCUGcuacauuuu
........((((.((((((((.((.(((((((((...((........))....))))))))).)).)))))))).)))).

Structure

uacucuau    c        a  c         -aac  gau 
        gaau uaguggaa ca uuccgcaca    ua   u
        |||| |||||||| || |||||||||    ||    
        uuua aucGUCUU GU AAGGCGUGU    au   u
-------u    c        C  A         Gacc  agu 

Annotation confidence Low

Genome context

JH000507.1: 1007910-1007989 [-]

Mature cgr-miR-147

• Accession: MIMAT0023777
• Description: Cricetulus griseus cgr-miR-147 mature miRNA
• Sequence: 53 - GUGUGCGGAAAUGCUUCUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75