Stem-loop cgr-mir-186

Accession

MI0020430

Description

Cricetulus griseus cgr-mir-186 precursor miRNA

Sequence

197836 reads, 2762 reads per million, 6 experiments

uacaacuuucCAAAGAAUUCUCCUUUUGGGCUUucucauuuuauuuuaaGCCCAAAGGUGAAUUUUUUGGgaaguauga
....((((((((((((((((.(((((.((((((..............))))))))))).))))))))))))))))....

Structure

uaca                U     U      ucucau 
    acuuucCAAAGAAUUC CCUUU GGGCUU      u
    |||||||||||||||| ||||| ||||||       
    ugaagGGUUUUUUAAG GGAAA CCCGaa      u
agua                U     -      uuuuau 

Annotation confidence Medium

Genome context

JH000264.1: 705202-705280 [-]

Mature cgr-miR-186-5p

• Accession: MIMAT0023813
• Description: Cricetulus griseus cgr-miR-186-5p mature miRNA
• Sequence: 11 - CAAAGAAUUCUCCUUUUGGGCUU - 33
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-186-3p

• Accession: MIMAT0023814
• Description: Cricetulus griseus cgr-miR-186-3p mature miRNA
• Sequence: 50 - GCCCAAAGGUGAAUUUUUUGG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75