Stem-loop cgr-mir-190b

Accession

MI0020436

Description

Cricetulus griseus cgr-mir-190b precursor miRNA

Sequence

2916 reads, 40 reads per million, 6 experiments

gcuucugugUGAUAUGUUUGAUAUUGGGUUGuuaaauuaggaaccaacuaaaugucaaacauauucucauagcagugagg
(((.(((((.(((((((((((((((.(((((((........)).))))).)))))))))))))))..))))).)))....

Structure

----   u     -U               G     -  aaa 
    gcu cugug  GAUAUGUUUGAUAUU GGUUG uu   u
    ||| |||||  ||||||||||||||| ||||| ||    
    uga gauac  uuauacaaacuguaa ucaac aa   u
ggag   c     uc               a     c  gga 

Annotation confidence Not enough data

Genome context

JH000275.1: 1258190-1258269 [+]

Mature cgr-miR-190b

• Accession: MIMAT0023821
• Description: Cricetulus griseus cgr-miR-190b mature miRNA
• Sequence: 10 - UGAUAUGUUUGAUAUUGGGUUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75