Stem-loop cgr-mir-210

Accession

MI0020458

Description

Cricetulus griseus cgr-mir-210 precursor miRNA

Sequence

22238 reads, 292 reads per million, 6 experiments

ggcucaggacAGCCACUGCCCACCGCACACUGcguugcuccggacccaCUGUGCGUGUGACAGCGGCUGAucugucccu
((..((((.(((((.(((..(((((((((.((.(((......))).)).)))))).))).))).))))).))))..)).

Structure

-  cu    a     A   CC   -      C  c   gc 
 gg  cagg cAGCC CUG  CAC CGCACA UG guu  u
 ||  |||| ||||| |||  ||| |||||| || |||   
 cc  gucu GUCGG GAC  GUG GCGUGU ac cag  c
u  cu    A     C   -A   U      C  c   gc 

Annotation confidence Not enough data

Genome context

JH001184.1: 77044-77122 [-]

Mature cgr-miR-210-5p

• Accession: MIMAT0023848
• Description: Cricetulus griseus cgr-miR-210-5p mature miRNA
• Sequence: 11 - AGCCACUGCCCACCGCACACUG - 32
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-210-3p

• Accession: MIMAT0023849
• Description: Cricetulus griseus cgr-miR-210-3p mature miRNA
• Sequence: 49 - CUGUGCGUGUGACAGCGGCUGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75