Stem-loop cgr-mir-212

Accession

MI0020459

Description

Cricetulus griseus cgr-mir-212 precursor miRNA

Sequence

5413 reads, 33 reads per million, 6 experiments

cgcgccggcACCUUGGCUCUAGACUGCUUACUgcccgggccgcccucaguaacagucuccagucac
.((....))....(((((..((((((.((((((...(((...))).))))))))))))..))))).

Structure

cgcgccggcACCU     CU      C      ccc   c 
             UGGCU  AGACUG UUACUg   ggg  
             |||||  |||||| ||||||   ||| c
             acuga  ucugac aaugac   ccc  
------------c     cc      -      --u   g 

Annotation confidence Low

Genome context

JH000768.1: 800029-800094 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cgr-mir-212

Mature cgr-miR-212

• Accession: MIMAT0023850
• Description: Cricetulus griseus cgr-miR-212 mature miRNA
• Sequence: 10 - ACCUUGGCUCUAGACUGCUUACU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75