Stem-loop cgr-mir-218a

Accession

MI0020462

Description

Cricetulus griseus cgr-mir-218a precursor miRNA

Sequence

8977 reads, 115 reads per million, 6 experiments

ggcuuuccuUUGUGCUUGAUCUAACCAUGUGguggaacgauggaaacggaacaugguucugucaagcaccgcggaaagua
.(((((((...(((((((((..((((((((..((............))..))))))))..)))))))))...))))))).

Structure

g       uUU         CU        Gg  gaacg 
 gcuuucc   GUGCUUGAU  AACCAUGU  ug     a
 |||||||   |||||||||  ||||||||  ||      
 ugaaagg   cacgaacug  uugguaca  gc     u
a       cgc         uc        ag  aaagg 

Annotation confidence Low

Genome context

JH000047.1: 925537-925616 [+]

Mature cgr-miR-218a

• Accession: MIMAT0023855
• Description: Cricetulus griseus cgr-miR-218a mature miRNA
• Sequence: 10 - UUGUGCUUGAUCUAACCAUGUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75