Stem-loop cgr-mir-32

Accession

MI0020490

Description

Cricetulus griseus cgr-mir-32 precursor miRNA

Sequence

6867 reads, 95 reads per million, 6 experiments

cugguggagaUAUUGCACAUUACUAAGUUGCauguugucacggccucagugCAAUUUAGUGUGUGUGAUAUUuucacguga
...(((((((((((((((((.((((((((((((((((...))))....)))))))))))))))))))))))))))))....

Structure

-cug                 U            ----    u 
    guggagaUAUUGCACAU ACUAAGUUGCau    guug  
    ||||||||||||||||| ||||||||||||    |||| c
    cacuuUUAUAGUGUGUG UGAUUUAACgug    cggc  
agug                 -            acuc    a 

Annotation confidence Not enough data

Genome context

JH000228.1: 1290648-1290728 [-]

Mature cgr-miR-32-5p

• Accession: MIMAT0023904
• Description: Cricetulus griseus cgr-miR-32-5p mature miRNA
• Sequence: 11 - UAUUGCACAUUACUAAGUUGC - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-32-3p

• Accession: MIMAT0023905
• Description: Cricetulus griseus cgr-miR-32-3p mature miRNA
• Sequence: 52 - CAAUUUAGUGUGUGUGAUAUU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75