Stem-loop cgr-mir-320a

Accession

MI0020491

Description

Cricetulus griseus cgr-mir-320a precursor miRNA

Literature search

1 open access papers mention cgr-mir-320a
(2 sentences)

Sequence

516065 reads, 1473.0 reads per million, 55 experiments

gcgccucgcuacccuccGCCUUCUCUUCCCGGUUCUUCCcggagucgggAAAAGCUGGGUUGAGAGGGCGAAaaaaaaag
(((...))).......(((((((((..(((((((.((((((....)))))).)))))))..)))))))))..........

Structure

gcgccucgcuacccuc         UU       C      g 
                cGCCUUCUC  CCCGGUU UUCCcg a
                |||||||||  ||||||| ||||||  
                GCGGGAGAG  GGGUCGA AAgggc g
------gaaaaaaaAA         UU       A      u 

Annotation confidence Medium

Genome context

JH000034.1: 1890160-1890239 [-]

Mature cgr-miR-320a-5p

• Accession: MIMAT0052461
• Description: Cricetulus griseus cgr-miR-320a-5p mature miRNA
• Sequence: 18 - GCCUUCUCUUCCCGGUUCUUCC - 39
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-320a-3p

• Accession: MIMAT0023906
• Description: Cricetulus griseus cgr-miR-320a-3p mature miRNA
• Sequence: 50 - AAAAGCUGGGUUGAGAGGGCGAA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75