Stem-loop cgr-mir-326

Accession

MI0020495

Description

Cricetulus griseus cgr-mir-326 precursor miRNA

Sequence

5152 reads, 25.0 reads per million, 55 experiments

cuauugggcuGGGGGCAGGGCCUUUGUGAAGGCGgguuaugcucggaucgCCUCUGGGCCCUUCCUCCAGUcccgaggca
...((((((((((((.(((((((..((((...(((((...)))))..))))....))))))).))))))).)))))....

Structure

-cua     -       C       --UU    AGG     u 
    uuggg cuGGGGG AGGGCCU    GUGA   CGggu  
    ||||| ||||||| |||||||    ||||   ||||| a
    agccc GACCUCC UCCCGGG    Cgcu   gcucg  
acgg     U       U       UCUC    -ag     u 

Annotation confidence High

Genome context

JH003146.1: 63107-63186 [-]

Mature cgr-miR-326-5p

• Accession: MIMAT0052462
• Description: Cricetulus griseus cgr-miR-326-5p mature miRNA
• Sequence: 11 - GGGGGCAGGGCCUUUGUGAAGGCG - 34
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-326-3p

• Accession: MIMAT0023913
• Description: Cricetulus griseus cgr-miR-326-3p mature miRNA
• Sequence: 51 - CCUCUGGGCCCUUCCUCCAGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75