Stem-loop cgr-mir-331

Accession

MI0020498

Description

Cricetulus griseus cgr-mir-331 precursor miRNA

Sequence

2338 reads, 32 reads per million, 6 experiments

uggguuuguuCUAGGUAUGGUCCCAGGGAUCccagaucaaaccagGCCCCUGGGCCUAUCCUAGAaccaaccua
((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).))))))

Structure

      u        U    U       AUC  agau 
uggguu guuCUAGG AUGG CCCAGGG   cc    c
|||||| |||||||| |||| |||||||   ||    a
auccaa caAGAUCC UAUC GGGUCCC   Gg    a
      c        -    C       --C  acca 

Annotation confidence Low

Genome context

JH000270.1: 1491783-1491856 [-]

Mature cgr-miR-331-5p

• Accession: MIMAT0023916
• Description: Cricetulus griseus cgr-miR-331-5p mature miRNA
• Sequence: 11 - CUAGGUAUGGUCCCAGGGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-331-3p

• Accession: MIMAT0023917
• Description: Cricetulus griseus cgr-miR-331-3p mature miRNA
• Sequence: 46 - GCCCCUGGGCCUAUCCUAGA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75