Stem-loop cgr-mir-361

Accession

MI0020509

Description

Cricetulus griseus cgr-mir-361 precursor miRNA

Sequence

9427 reads, 39.0 reads per million, 55 experiments

cuuggaagcUUAUCAGAAUCUCCAGGGGUACuuauuauuugaaaaagUCCCCCAGGUGUGGUUCUGAUUcguuuccuucu
...((((((..(((((((((.((.((((.((((...........)))).)))).))...)))))))))..))))))....

Structure

-cuu      UU         --U  A    U    auua 
    ggaagc  AUCAGAAUC   CC GGGG ACuu    u
    ||||||  |||||||||   || |||| ||||    u
    ccuuug  UAGUCUUGG   GG CCCC Ugaa    u
ucuu      cU         UGU  A    C    aaag 

Annotation confidence Medium

Genome context

JH001478.1: 84893-84972 [+]

Mature cgr-miR-361-5p

• Accession: MIMAT0023933
• Description: Cricetulus griseus cgr-miR-361-5p mature miRNA
• Sequence: 10 - UUAUCAGAAUCUCCAGGGGUAC - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-361-3p

• Accession: MIMAT0052468
• Description: Cricetulus griseus cgr-miR-361-3p mature miRNA
• Sequence: 48 - UCCCCCAGGUGUGGUUCUGAUU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75