Stem-loop cgr-mir-374

Accession

MI0020513

Description

Cricetulus griseus cgr-mir-374 precursor miRNA

Sequence

13458 reads, 187 reads per million, 6 experiments

cucggauggAUAUAAUACAACCUGCUAAGUGuucuagcaCUUAUCAGGUUGUAUUAUCAUUguccguguuu
..(((((((..(((((((((((((.(((((((....))))))).)))))))))))))..))))))).....

Structure

---cu       AU             C       u 
     cggaugg  AUAAUACAACCUG UAAGUGu c
     |||||||  ||||||||||||| |||||||  
     gccugUU  UAUUAUGUUGGAC AUUCacg u
uuugu       AC             U       a 

Annotation confidence High

Genome context

JH000656.1: 639645-639715 [+]

Mature cgr-miR-374-5p

• Accession: MIMAT0023939
• Description: Cricetulus griseus cgr-miR-374-5p mature miRNA
• Sequence: 10 - AUAUAAUACAACCUGCUAAGUG - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-374-3p

• Accession: MIMAT0023940
• Description: Cricetulus griseus cgr-miR-374-3p mature miRNA
• Sequence: 40 - CUUAUCAGGUUGUAUUAUCAUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75