Stem-loop cgr-mir-455

Accession

MI0020528

Description

Cricetulus griseus cgr-mir-455 precursor miRNA

Sequence

54974 reads, 179.0 reads per million, 55 experiments

ggugugagcgUAUGUGCCUUUGGACUACAUCGUggacgcagcaccauGCAGUCCACGGGCAUAUACACUUGccucaag
((.(((((.((((((((((.((((((.(((.(((.......))).))).)))))).)))))))))).))))).))...

Structure

---  u     c          U      A   C   ga 
   gg gugag gUAUGUGCCU UGGACU CAU GUg  c
   || ||||| |||||||||| |||||| ||| |||  g
   cu cGUUC CAUAUACGGG ACCUGA Gua cac  c
gaa  c     A          C      C   c   ga 

Annotation confidence Medium

Genome context

JH000394.1: 390033-390110 [-]

Mature cgr-miR-455-5p

• Accession: MIMAT0023964
• Description: Cricetulus griseus cgr-miR-455-5p mature miRNA
• Sequence: 11 - UAUGUGCCUUUGGACUACAUCGU - 33
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-455-3p

• Accession: MIMAT0023965
• Description: Cricetulus griseus cgr-miR-455-3p mature miRNA
• Sequence: 48 - GCAGUCCACGGGCAUAUACACUUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75