Stem-loop cgr-mir-582

Accession

MI0020541

Description

Cricetulus griseus cgr-mir-582 precursor miRNA

Sequence

3292 reads, 11.0 reads per million, 48 experiments

guacucuuuggUUACAGUUGUUCAACCAGUUACUaaucuaacuaauugUAACCUGUUGAACAACUGAACCCaaagggugc
(((((((((((...((((((((((((..(((((..............)))))..))))))))))))...)))))))))))

Structure

           UUA            CA     Uaaucu 
guacucuuugg   CAGUUGUUCAAC  GUUAC      a
|||||||||||   ||||||||||||  |||||       
cgugggaaaCC   GUCAACAAGUUG  CAAUg      a
           CAA            UC     uuaauc 

Annotation confidence High

Genome context

JH000035.1: 1797957-1798036 [-]

Mature cgr-miR-582-5p

• Accession: MIMAT0052478
• Description: Cricetulus griseus cgr-miR-582-5p mature miRNA
• Sequence: 12 - UUACAGUUGUUCAACCAGUUACU - 34
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-582-3p

• Accession: MIMAT0023985
• Description: Cricetulus griseus cgr-miR-582-3p mature miRNA
• Sequence: 49 - UAACCUGUUGAACAACUGAACCC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75