Stem-loop cgr-mir-628

Accession

MI0020544

Description

Cricetulus griseus cgr-mir-628 precursor miRNA

Sequence

5410 reads, 75 reads per million, 6 experiments

ucgcuuccucAUGCUGACAUAUUUACUAGAGGguaaaaucaacagacuucugguaagaguggcagucgaagggaagggcucaccugacuucaggaacccg
.(.((((((...((((.(((.(((((((((((..............))))))))))).))).))))....)))))).)....((((....))))......

Structure

---------------------u g      -cAU    A   A           guaaaa 
                      c cuuccu    GCUG CAU UUUACUAGAGG      u
                      | ||||||    |||| ||| |||||||||||       
                      g gaaggg    ugac gug gaauggucuuc      c
gcccaaggacuucaguccacuc g      aagc    g   a           agacaa 

Annotation confidence Not enough data

Genome context

JH000003.1: 3400307-3400406 [-]

Mature cgr-miR-628

• Accession: MIMAT0023989
• Description: Cricetulus griseus cgr-miR-628 mature miRNA
• Sequence: 11 - AUGCUGACAUAUUUACUAGAGG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75