Stem-loop cgr-mir-664

Accession

MI0020548

Description

Cricetulus griseus cgr-mir-664 precursor miRNA

Sequence

10612 reads, 148 reads per million, 6 experiments

acauugaagCUGGCUGGGGAAAAUGAUUGGAuagaaagcacuguucUAUUCAUUUACUCCCCAGCCUACaaacaaaaau
...........(((((((((...(((.(((((((((.......))))))))).))).))))))))).............

Structure

--acauugaagCU         AAA   U         ag 
             GGCUGGGGA   UGA UGGAuagaa  c
             |||||||||   ||| |||||||||  a
             CCGACCCCU   AUU ACUUAUcuu  c
uaaaaacaaaCAU         --C   U         gu 

Annotation confidence Not enough data

Genome context

JH000002.1: 3254500-3254578 [+]

Mature cgr-miR-664-5p

• Accession: MIMAT0023994
• Description: Cricetulus griseus cgr-miR-664-5p mature miRNA
• Sequence: 10 - CUGGCUGGGGAAAAUGAUUGGA - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-664-3p

• Accession: MIMAT0023995
• Description: Cricetulus griseus cgr-miR-664-3p mature miRNA
• Sequence: 47 - UAUUCAUUUACUCCCCAGCCUAC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75