Stem-loop cgr-mir-674

Accession

MI0020551

Description

Cricetulus griseus cgr-mir-674 precursor miRNA

Sequence

49291 reads, 215.0 reads per million, 55 experiments

caucacccugagccuuGCACUGAGAUGGGAGUGGUGUAaggcuuaagugugCACAGCUCCCAUCUCAGAACaaggcucag
.......((((((((((..(((((((((((((.(((((..((....)).))))).)))))))))))))..))))))))))

Structure

caucacc          CA             G     ag  u 
       cugagccuuG  CUGAGAUGGGAGU GUGUA  gc u
       ||||||||||  ||||||||||||| |||||  ||  
       gacucggaaC  GACUCUACCCUCG CACgu  ug a
-------          AA             A     -g  a 

Annotation confidence High

Genome context

JH000389.1: 1482967-1483046 [-]

Mature cgr-miR-674-5p

• Accession: MIMAT0052481
• Description: Cricetulus griseus cgr-miR-674-5p mature miRNA
• Sequence: 17 - GCACUGAGAUGGGAGUGGUGUA - 38
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-674-3p

• Accession: MIMAT0023999
• Description: Cricetulus griseus cgr-miR-674-3p mature miRNA
• Sequence: 52 - CACAGCUCCCAUCUCAGAAC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75