Stem-loop cgr-mir-702

Accession

MI0020552

Description

Cricetulus griseus cgr-mir-702 precursor miRNA

Sequence

6939 reads, 107 reads per million, 6 experiments

cgggacaagGUGAGUGGGGUGGUUGGCAUGgguugccaaguccggggacuugaugcugugucgacagcuuccuguugucc
..((((((.(...(.(((((.((((((((((.....((((((....))))))...)))))))))).))))))).))))))

Structure

cg      g UGA U     G          guugc      c 
  ggacaa G   G GGGGU GUUGGCAUGg     caaguc g
  |||||| |   | ||||| ||||||||||     ||||||  
  ccuguu u   c cuucg cagcuguguc     guucag g
--      g --- -     a          --gua      g 

Annotation confidence Not enough data

Genome context

JH000243.1: 1813802-1813881 [+]

Mature cgr-miR-702

• Accession: MIMAT0024000
• Description: Cricetulus griseus cgr-miR-702 mature miRNA
• Sequence: 10 - GUGAGUGGGGUGGUUGGCAUG - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75