Stem-loop cgr-mir-7b

Accession

MI0020556

Description

Cricetulus griseus cgr-mir-7b precursor miRNA

Literature search

2 open access papers mention cgr-mir-7b
(7 sentences)

Sequence

1330 reads, 5.0 reads per million, 41 experiments

agugcuaugUGGAAGACUUGUGAUUUUGUUGUUcuaaugugauaugaCAACAAGUCACAGCCGGCCUcauagcguggacu
...((((((.((..(.((.(((((((.((((((.((......)).))))))))))))))).)..)).)))))).......

Structure

----agu      U  AA A  U       U      c  au 
       gcuaug GG  G CU GUGAUUU GUUGUU ua  g
       |||||| ||  | || ||||||| |||||| ||   
       cgauac CC  C GA CACUGAA CAACag au  u
ucaggug      U  GG C  -       -      u  ag 

Annotation confidence High

Genome context

JH000282.1: 434229-434308 [+]

Mature cgr-miR-7b-5p

• Accession: MIMAT0024004
• Description: Cricetulus griseus cgr-miR-7b-5p mature miRNA
• Sequence: 10 - UGGAAGACUUGUGAUUUUGUUGUU - 33
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-7b-3p

• Accession: MIMAT0052483
• Description: Cricetulus griseus cgr-miR-7b-3p mature miRNA
• Sequence: 48 - CAACAAGUCACAGCCGGCCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75