Stem-loop cgr-mir-874

Accession

MI0020558

Description

Cricetulus griseus cgr-mir-874 precursor miRNA

Sequence

2419 reads, 11.0 reads per million, 47 experiments

gguguuagcccugCGGCCCCACGCACCAGGGUAAGagagacuugcuucCUGCCCUGGCCCGAGGGACCGACuggcugggc
....((((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))))..

Structure

ggug      cug   C   A  CA        A   aga 
    uuagcc   CGG CCC CG  CCAGGGUA Gag   c
    ||||||   ||| ||| ||  |||||||| |||    
    ggucgg   GCC GGG GC  GGUCCCGU cuu   u
--cg      uCA   A   A  CC        C   cgu 

Annotation confidence High

Genome context

JH002506.1: 75046-75125 [-]

Mature cgr-miR-874-5p

• Accession: MIMAT0052484
• Description: Cricetulus griseus cgr-miR-874-5p mature miRNA
• Sequence: 14 - CGGCCCCACGCACCAGGGUAAG - 35
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-874-3p

• Accession: MIMAT0024007
• Description: Cricetulus griseus cgr-miR-874-3p mature miRNA
• Sequence: 49 - CUGCCCUGGCCCGAGGGACCGAC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75