Stem-loop cgr-mir-92b

Accession

MI0020561

Description

Cricetulus griseus cgr-mir-92b precursor miRNA

Literature search

1 open access papers mention cgr-mir-92b
(1 sentences)

Sequence

6956 reads, 80 reads per million, 6 experiments

ggcgggcgggAGGGACGGGACGCGGUGCAGUGUUguucuuucccccgccaaUAUUGCACUCGUCCCGGCCUCCggcccccuc
((.((((.(((((..(((((((.((((((((((((.............))))))))))))))))))).))))).))))))..

Structure

--  c    g     GA       C            uucuu 
  gg gggc ggAGG  CGGGACG GGUGCAGUGUUg     u
  || |||| |||||  ||||||| ||||||||||||     c
  cc cccg CCUCC  GCCCUGC UCACGUUAUaac     c
cu  -    g     -G       -            cgccc 

Annotation confidence Low

Genome context

JH000275.1: 397429-397510 [-]

Mature cgr-miR-92b-5p

• Accession: MIMAT0024011
• Description: Cricetulus griseus cgr-miR-92b-5p mature miRNA
• Sequence: 11 - AGGGACGGGACGCGGUGCAGUGUU - 34
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-92b-3p

• Accession: MIMAT0024012
• Description: Cricetulus griseus cgr-miR-92b-3p mature miRNA
• Sequence: 52 - UAUUGCACUCGUCCCGGCCUCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75