Stem-loop cgr-mir-98

Accession

MI0020563

Description

Cricetulus griseus cgr-mir-98 precursor miRNA

Sequence

18034 reads, 221 reads per million, 6 experiments

augcuggggUGAGGUAGUAAGUUGUAUUGUUgugggguagggauuuugggccccaauaagaagauaacuauacaacuuac
................(((((((((((.((((((((((...........)))))).........)))).)))))))))))

Structure

augcuggggUGAGGUA           U    ---------      aggg 
                GUAAGUUGUAU GUUg         uggggu    a
                ||||||||||| ||||         ||||||    u
                cauucaacaua caau         accccg    u
----------------           u    agaagaaua      gguu 

Annotation confidence Not enough data

Genome context

JH000201.1: 1737577-1737656 [+]

Mature cgr-miR-98

• Accession: MIMAT0024015
• Description: Cricetulus griseus cgr-miR-98 mature miRNA
• Sequence: 10 - UGAGGUAGUAAGUUGUAUUGUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75