Stem-loop rno-mir-1306

Accession

MI0021537

Description

Rattus norvegicus rno-mir-1306 precursor miRNA

Literature search

2 open access papers mention rno-mir-1306
(12 sentences)

Sequence

2292 reads, 3 reads per million, 384 experiments

agucuccaCCACCUCCCCUGCAAACGUCCAgugaugcagagguaaugGACGUUGGCUCUGGUGGUGAUGgaca
.((((.(((((((......((.((((((((...((......))..)))))))).))...)))))))..)))).

Structure

a    -c       UCCCCU  A        gug  gc 
 gucu  caCCACC      GC AACGUCCA   au  a
 ||||  |||||||      || ||||||||   ||   
 cagG  GUGGUGG      CG UUGCAGgu   ug  g
a    UA       ---UCU  G        -aa  ga 

Annotation confidence High

Genome context

chr11: 86857633-86857705 [+]

Mature rno-miR-1306-5p

• Accession: MIMAT0024851
• Description: Rattus norvegicus rno-miR-1306-5p mature miRNA
• Sequence: 9 - CCACCUCCCCUGCAAACGUCCA - 30
• Evidence: experimental ; Illumina [1]

Mature rno-miR-1306-3p

• Accession: MIMAT0024852
• Description: Rattus norvegicus rno-miR-1306-3p mature miRNA
• Sequence: 48 - GACGUUGGCUCUGGUGGUGAUG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22470567
   Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation
   Meng F, Hackenberg M, Li Z, Yan J, Chen T
   PLoS One (2012) 7:e34394