Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation |
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|---|---|
| PubMed ID | 22470567 |
| Authors | Meng F, Hackenberg M, Li Z, Yan J, Chen T |
| Journal | PLoS One |
| Volume | 7 |
| Pages | e34394 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| rno-mir-1839 | MI0021533 | 114 | chr1 | 143360224 | 143360287 | + | High |
| rno-mir-3068 | MI0021534 | 159 | chr6 | 111468732 | 111468807 | - | High |
| rno-mir-1843a | MI0021535 | 174 | chr6 | 103567572 | 103567661 | - | High |
| rno-mir-509 | MI0021536 | 73 | chrX | 155317206 | 155317290 | + | High |
| rno-mir-1306 | MI0021537 | 17 | chr11 | 86857633 | 86857705 | + | Medium |
| rno-mir-3473 | MI0021538 | 11681 | chr13 | 44719335 | 44719401 | + | - |
| rno-mir-6215 | MI0021539 | 4 | chr5 | 158060994 | 158061060 | - | - |
| rno-mir-378b | MI0021540 | 13 | chr5 | 5575616 | 5575699 | - | - |
| rno-mir-6216 | MI0021541 | 8 | chr3 | 46361908 | 46361985 | - | High |
| mmu-let-7g | MI0000137 | 17749 | 9 | 106056039 | 106056126 | + | High |
| mmu-let-7i | MI0000138 | 16255 | 10 | 122821545 | 122821629 | - | High |
| mmu-let-7d | MI0000405 | 18752 | 13 | 48689488 | 48689590 | - | High |
| mmu-let-7a-1 | MI0000556 | 54921 | 13 | 48691655 | 48691748 | - | High |
| mmu-let-7a-2 | MI0000557 | 54880 | 9 | 41448012 | 41448107 | + | High |
| mmu-let-7b | MI0000558 | 17501 | 15 | 85591520 | 85591604 | + | High |
| mmu-let-7c-1 | MI0000559 | 47495 | 16 | 77396545 | 77396638 | + | High |
| mmu-let-7c-2 | MI0000560 | 47445 | 15 | 85590804 | 85590898 | + | High |
| mmu-let-7e | MI0000561 | 4644 | 17 | 18050614 | 18050706 | + | High |
| mmu-let-7f-1 | MI0000562 | 107727 | 13 | 48691305 | 48691393 | - | High |
| mmu-let-7f-2 | MI0000563 | 108671 | X | 150695342 | 150695424 | + | High |
| rno-let-7d | MI0000601 | 1221 | chr17 | 16419980 | 16420077 | + | High |
| rno-let-7a-1 | MI0000827 | 3545 | chr17 | 16417853 | 16417946 | + | High |
| rno-let-7a-2 | MI0000828 | 3492 | chr8 | 45753264 | 45753359 | + | High |
| rno-let-7b | MI0000829 | 1369 | chr7 | 126590627 | 126590711 | + | High |
| rno-let-7c-1 | MI0000830 | 4658 | chr11 | 16052873 | 16052966 | + | High |
| rno-let-7c-2 | MI0000831 | 5130 | chr7 | 126590212 | 126590306 | + | High |
| rno-let-7e | MI0000832 | 454 | chr1 | 59704381 | 59704473 | + | High |
| rno-let-7f-1 | MI0000833 | 10069 | chr17 | 16418221 | 16418309 | + | High |
| rno-let-7f-2 | MI0000834 | 9992 | chrX | 21583272 | 21583354 | + | High |
| rno-let-7i | MI0000835 | 3479 | chr7 | 66802731 | 66802815 | + | High |
| mmu-mir-1843a | MI0004155 | 138 | 12 | 80438387 | 80438451 | - | High |
| mmu-mir-509 | MI0005516 | 0 | X | 67053711 | 67053785 | - | - |
| mmu-mir-1306 | MI0009935 | 111 | 16 | 18102103 | 18102181 | - | High |
| mmu-mir-1839 | MI0009991 | 2633 | 7 | 81179664 | 81179736 | + | High |
| mmu-mir-3068 | MI0014030 | 248 | 12 | 87484449 | 87484527 | - | High |
| mmu-mir-1843b | MI0016971 | 158 | 1 | 159167928 | 159167993 | + | High |
| mmu-let-7j | MI0021908 | 37 | 3 | 139734010 | 139734131 | + | - |
| mmu-let-7k | MI0022352 | 67 | 5 | 147219999 | 147220108 | - | - |
| rno-let-7g | MI0030347 | 2878 | chr8 | 114874457 | 114874544 | + | High |
| rno-mir-1843b | MI0030353 | 76 | chr13 | 77065446 | 77065507 | + | High |