Stem-loop rno-mir-6216

Accession

MI0021541

Description

Rattus norvegicus rno-mir-6216 precursor miRNA

Literature search

3 open access papers mention rno-mir-6216
(5 sentences)

Sequence

409 reads, 1.0 reads per million, 189 experiments

gagguguuugcugGAUACACAGAGGCAGGAGGAGAAagaaguauuUCCUCCUGCAUCUGUGUGUAUagcaggcacuuu
(((((((((((((.(((((((((.(((((((((((........))))))))))).))))))))).)))))))))))))

Structure

             G         G           Aag 
gagguguuugcug AUACACAGA GCAGGAGGAGA   a
||||||||||||| ||||||||| |||||||||||    
uuucacggacgaU UGUGUGUCU CGUCCUCCUuu   a
             A         A           aug 

Annotation confidence High

Genome context

chr3: 46361908-46361985 [-]

Mature rno-miR-6216-5p

• Accession: MIMAT0024856
• Description: Rattus norvegicus rno-miR-6216-5p mature miRNA
• Sequence: 14 - GAUACACAGAGGCAGGAGGAGAA - 36
• Evidence: experimental ; Illumina [1]

Mature rno-miR-6216-3p

• Accession: MIMAT0052036
• Description: Rattus norvegicus rno-miR-6216-3p mature miRNA
• Sequence: 46 - UCCUCCUGCAUCUGUGUGUAU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22470567
   Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation
   Meng F, Hackenberg M, Li Z, Yan J, Chen T
   PLoS One (2012) 7:e34394