Stem-loop rno-mir-378b

Accession

MI0021540

Description

Rattus norvegicus rno-mir-378b precursor miRNA

Literature search

26 open access papers mention rno-mir-378b
(114 sentences)

Sequence

1139 reads, 13 reads per million, 207 experiments

aggagaacAGUGGACUUGGAGUCAGAAGGucuguguggaacugggccuccgacauggacuaucacugaccaugauuccauuccg
.(((.....(((((.(((..(((((..((((((((((((........))).)))))))))....)))))..))).)))))))).

Structure

a   gaacA     C   GA     --AA         -   acu 
 gga     GUGGA UUG  GUCAG    GGucugugu gga   g
 |||     ||||| |||  |||||    ||||||||| |||    
 ccu     uaccu agu  caguc    ucagguaca ccu   g
g   -----     u   ac     acua         g   ccg 

Annotation confidence Not enough data

Genome context

chr5: 5575616-5575699 [-]

Mature rno-miR-378b

• Accession: MIMAT0024855
• Description: Rattus norvegicus rno-miR-378b mature miRNA
• Sequence: 9 - AGUGGACUUGGAGUCAGAAGG - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22470567
   Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation
   Meng F, Hackenberg M, Li Z, Yan J, Chen T
   PLoS One (2012) 7:e34394