Accession
MI0021608
Description
Prunus persica
ppe-MIR6258 precursor miRNA
Sequence
3868
reads,
138.0
reads per million, 20 experiments
ccaaauuuggUUCCAGCUGUAAAGAUCAAGAgagagaggcugacaagucccuucccaugccacagaaaaucacacgcuugauauacaaccuuuggacugcaucuuuguggcaugggaagggaucuuucacccuuccucacucUUGCUCUUUACAGCCGGAACCcauuuuggu
(((((...((((((.((((((((((.((((((.((((((.(((.((((((((((((((((((((((..((((......))))......((...))........))))))))))))))))))).)))))).)))..))).)))))).)))))))))).))))))...))))).
(((((...((((((.((((((((((.((((((.((((((.(((.((((((((((((((((((((((..((((......))))......((...))........))))))))))))))))))).)))))).)))..))).)))))).)))))))))).))))))...))))).
Structure
- uuu A U a -- c c - -------------------aa ca ccaaa ggUUCC GCUGUAAAGA CAAGAg gag agg uga aag ucccuucccaugccacaga auca c ||||| |||||| |||||||||| |||||| ||| ||| ||| ||| ||||||||||||||||||| |||| gguuu CCAAGG CGACAUUUCU GUUcuc cuc ucc acu uuc agggaaggguacgguguuu uagu g u uac C C a cu c - u cuacgucagguuuccaacaua uc
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG1: 230371-230542 [+]
Database links
Mature ppe-miR6258-5p
| Accession | MIMAT0027271 |
| Description | Prunus persica ppe-miR6258-5p mature miRNA |
| Sequence | 11 - UUCCAGCUGUAAAGAUCAAGA - 31 |
| Evidence |
experimental
Illumina [1] |
Mature ppe-miR6258-3p
| Accession | MIMAT0058461 |
| Description | Prunus persica ppe-miR6258-3p mature miRNA |
| Sequence | 143 - UUGCUCUUUACAGCCGGAACC - 163 |
| Evidence |
experimental
unknown |
References
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